BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B01SP1|AL427996
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig410 995 0.0
>3x_Contig410
Length = 1641
Score = 995 bits (501), Expect = 0.0
Identities = 515/517 (99%), Gaps = 2/517 (0%)
Strand = Plus / Plus
Query: 1 gatccgtgtcttggatgagtccactgcattttctgcagaaagattattgaaaaattcgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 gatccgtgtcttggatgagtccactgcattttctgcagaaagattattgaaaaattcgtt 1184
Query: 61 ggttagcaaacatccatctatttgttctgcttctttggtcagttcataccatttattacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 ggttagcaaacatccatctatttgttctgcttctttggtcagttcataccatttattacc 1244
Query: 121 aatcgctgaaactacggtgaagagatttgctaatgagactcaggaagccgttggtgattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1245 aatcgctgaaactacggtgaagagatttgctaatgagactcaggaagccgttggtgattt 1304
Query: 181 gaaacagttgccatatccagatgagaacagtagatattatccaactacgtctcatatctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1305 gaaacagttgccatatccagatgagaacagtagatattatccaactacgtctcatatctc 1364
Query: 241 tcaataccatgcattgggtttgttgtaccaattgaagaatcacgataagatggctttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1365 tcaataccatgcattgggtttgttgtaccaattgaagaatcacgataagatggctttgat 1424
Query: 301 caaattgatccaacagtttgccggtcattcttcaccattgaaaaatcaattggctcaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1425 caaattgatccaacagtttgccggtcattcttcaccattgaaaaatcaattggctcaagt 1484
Query: 361 acaaatggttaaattcgtgcaccaattggttttgaaggatcctaactccatcccccagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1485 acaaatggttaaattcgtgcaccaattggttttgaaggatcctaactccatcccccagtt 1544
Query: 421 cttaccactaatagctaattggttgcaaagcagacacgaggctgttgctttggaagctt- 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1545 cttaccactaatagctaattggttgcaaagcagacacgaggctgttgctttggaagcttg 1604
Query: 480 gtaagcttactgcg-tctctatccaacttggttccta 515
|||||||||||||| ||||||||||||||||||||||
Sbjct: 1605 gtaagcttactgcgttctctatccaacttggttccta 1641
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8862
Number of Sequences: 1807
Number of extensions: 8862
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)